1.1 --- a/scripts/last-dotplot Mon May 14 14:15:33 2018 +0900
1.2 +++ b/scripts/last-dotplot Mon May 28 14:53:43 2018 +0900
1.3 @@ -239,12 +239,12 @@
1.4 yield oldBeg, maxEnd
1.5
1.6 def mergedRangesPerSeq(coverDict):
1.7 - for k, v in coverDict.iteritems():
1.8 + for k, v in coverDict.items():
1.9 v.sort()
1.10 yield k, list(mergedRanges(v))
1.11
1.12 def coveredLength(mergedCoverDict):
1.13 - return sum(sum(e - b for b, e in v) for v in mergedCoverDict.itervalues())
1.14 + return sum(sum(e - b for b, e in v) for v in mergedCoverDict.values())
1.15
1.16 def trimmed(seqRanges, coverDict, minAlignedBases, maxGapFrac, endPad, midPad):
1.17 maxEndGapFrac, maxMidGapFrac = twoValuesFromOption(maxGapFrac, ",")