12 months ago Martin C. Frith Small doc update default tip
12 months ago Martin C. Frith Big doc update
12 months ago Martin C. Frith train --codon: more data & better pseudocounts
12 months ago Martin C. Frith Better repeat-masking for new-style frameshifts
12 months ago Martin C. Frith Refactor
12 months ago Martin C. Frith Refactor
12 months ago Martin C. Frith Refactor
12 months ago Martin C. Frith last-train: add codon & frameshift options!
12 months ago Martin C. Frith Refactor
13 months ago Martin C. Frith Fix E-values for new-style frameshifts
13 months ago Martin C. Frith Try to fix floating-point infinite loops
13 months ago Martin C. Frith New frameshifts: fix print precision of score
13 months ago Martin C. Frith Better rep-masking for codons & new frameshifts
13 months ago Martin C. Frith Refactor
13 months ago Martin C. Frith Add last-train --scale option
13 months ago Martin C. Frith Refactor
13 months ago Martin C. Frith Refactor
13 months ago Martin C. Frith Change expected-count output for new frameshifts
13 months ago Martin C. Frith Refactor
13 months ago Martin C. Frith Refactor
13 months ago Martin C. Frith Add lastdb -q option
13 months ago Martin C. Frith Protein-codon alignment: use tantan on the DNA
13 months ago Martin C. Frith E-values for new-style frameshifts!
14 months ago Martin C. Frith Start implementing frameshift E-value simulation
14 months ago Martin C. Frith Allow for non-integer alignment scores
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Protein-codon alignment: fix writing X and *
14 months ago Martin C. Frith Reduce lastal memory use, sometimes
14 months ago Martin C. Frith Fix minor bugs in E-value finite-size correction
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Try to appease C++ compilers
14 months ago Martin C. Frith Add awk mismap trick to doc
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Add probabilities for new-style frameshifts
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Fix protein-codon alignment probabilities
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Refactor
14 months ago Martin C. Frith Refactor
15 months ago Martin C. Frith last-dotplot: fix crash on long annotation names
15 months ago Martin C. Frith last-dotplot: fix crash on annotation names
15 months ago Martin C. Frith Add new-style frameshifts (undocumented)
15 months ago Martin C. Frith Fix E-values for protein-codon alignment
15 months ago Martin C. Frith Start adding new-style frameshifts
15 months ago Martin C. Frith Refactor
15 months ago Martin C. Frith Add protein-codon alignment (undocumented)!
15 months ago Martin C. Frith Almost add protein-codon alignment
15 months ago Martin C. Frith A bit more protein-codon alignment
15 months ago Martin C. Frith Further implement protein-codon alignment
15 months ago Martin C. Frith Continue to implement protein-codon alignment
15 months ago Martin C. Frith Even more protein-codon alignment...
15 months ago Martin C. Frith Yet more protein-codon alignment...
15 months ago Martin C. Frith Further implement protein-codon alignment