3 weeks ago Martin C. Frith Fix E-values for new-style frameshifts default tip
3 weeks ago Martin C. Frith Try to fix floating-point infinite loops
4 weeks ago Martin C. Frith New frameshifts: fix print precision of score
5 weeks ago Martin C. Frith Better rep-masking for codons & new frameshifts
5 weeks ago Martin C. Frith Refactor
6 weeks ago Martin C. Frith Add last-train --scale option
6 weeks ago Martin C. Frith Refactor
6 weeks ago Martin C. Frith Refactor
6 weeks ago Martin C. Frith Change expected-count output for new frameshifts
6 weeks ago Martin C. Frith Refactor
6 weeks ago Martin C. Frith Refactor
6 weeks ago Martin C. Frith Add lastdb -q option
6 weeks ago Martin C. Frith Protein-codon alignment: use tantan on the DNA
6 weeks ago Martin C. Frith E-values for new-style frameshifts!
6 weeks ago Martin C. Frith Start implementing frameshift E-value simulation
6 weeks ago Martin C. Frith Allow for non-integer alignment scores
7 weeks ago Martin C. Frith Refactor
7 weeks ago Martin C. Frith Refactor
7 weeks ago Martin C. Frith Protein-codon alignment: fix writing X and *
7 weeks ago Martin C. Frith Reduce lastal memory use, sometimes
7 weeks ago Martin C. Frith Fix minor bugs in E-value finite-size correction
7 weeks ago Martin C. Frith Refactor
7 weeks ago Martin C. Frith Refactor
7 weeks ago Martin C. Frith Refactor
7 weeks ago Martin C. Frith Refactor
2 months ago Martin C. Frith Try to appease C++ compilers
2 months ago Martin C. Frith Add awk mismap trick to doc
2 months ago Martin C. Frith Refactor
2 months ago Martin C. Frith Refactor
2 months ago Martin C. Frith Add probabilities for new-style frameshifts
2 months ago Martin C. Frith Refactor
2 months ago Martin C. Frith Fix protein-codon alignment probabilities
2 months ago Martin C. Frith Refactor
2 months ago Martin C. Frith Refactor
2 months ago Martin C. Frith Refactor
2 months ago Martin C. Frith Refactor
2 months ago Martin C. Frith Refactor
3 months ago Martin C. Frith last-dotplot: fix crash on long annotation names
3 months ago Martin C. Frith last-dotplot: fix crash on annotation names
3 months ago Martin C. Frith Add new-style frameshifts (undocumented)
3 months ago Martin C. Frith Fix E-values for protein-codon alignment
3 months ago Martin C. Frith Start adding new-style frameshifts
3 months ago Martin C. Frith Refactor
3 months ago Martin C. Frith Add protein-codon alignment (undocumented)!
3 months ago Martin C. Frith Almost add protein-codon alignment
3 months ago Martin C. Frith A bit more protein-codon alignment
3 months ago Martin C. Frith Further implement protein-codon alignment
3 months ago Martin C. Frith Continue to implement protein-codon alignment
3 months ago Martin C. Frith Even more protein-codon alignment...
3 months ago Martin C. Frith Yet more protein-codon alignment...
3 months ago Martin C. Frith Further implement protein-codon alignment
3 months ago Martin C. Frith Still implementing protein-codon alignment...
3 months ago Martin C. Frith More protein-codon alignment...
3 months ago Martin C. Frith Further implement protein-codon alignment
3 months ago Martin C. Frith Continue implementing protein-codon alignment
3 months ago Martin C. Frith Start to implement protein-codon alignment
3 months ago Martin C. Frith Refactor
3 months ago Martin C. Frith Refactor
3 months ago Martin C. Frith Refactor
3 months ago Martin C. Frith Improve RY8 seeding