Mercuriallast / shortlog
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2017-11-02 Martin C. Frith Refactor last-dotplot changeset | files
2017-11-02 Martin C. Frith Tweak the dotplot colors changeset | files
2017-10-24 Martin C. Frith Make the code a bit more robust changeset | files
2017-10-24 Martin C. Frith Make last-split work with lastdb strand option changeset | files
2017-10-24 Martin C. Frith Fix some E-value & last-train fails changeset | files
2017-10-20 Martin C. Frith Add lastdb strand option changeset | files
2017-10-20 Martin C. Frith Refactor changeset | files
2017-10-19 Martin C. Frith Start implementing reverse strands in lastdb changeset | files
2017-10-19 Martin C. Frith Refactor changeset | files
2017-10-19 Martin C. Frith Refactor changeset | files
2017-10-19 Martin C. Frith Refactor changeset | files
2017-10-10 Martin C. Frith Make last-train print the lastal version changeset | files
2017-10-10 Martin C. Frith Refactor changeset | files
2017-10-10 Martin C. Frith Refactor (I think) changeset | files
2017-10-10 Martin C. Frith Refactor some code changeset | files
2017-10-10 Martin C. Frith Make last-train work with lastdb8 changeset | files
2017-10-06 Martin C. Frith Add maf-convert -> chain changeset | files
2017-10-06 Martin C. Frith Avoid some "can't get E-value parameters" errors changeset | files
2017-10-03 Martin C. Frith Add text-rotation options to last-dotplot changeset | files
2017-10-03 Martin C. Frith Fix mixed-up margin sizes in last-dotplot changeset | files
2017-09-27 Martin C. Frith Try to make the gz compilation work more portably changeset | files
2017-09-26 Martin C. Frith Add gz reading to: dotplot postmask train convert changeset | files
2017-09-22 Martin C. Frith Make the gz stuff compile on old computers changeset | files
2017-09-22 Martin C. Frith Try to make compilation more robust & portable changeset | files
2017-09-22 Martin C. Frith Enable lastal, lastdb, etc to read .gz files changeset | files
2017-09-22 Martin C. Frith Add option -k to last-train changeset | files
2017-09-22 Martin C. Frith Add -x % option to lastal changeset | files
2017-06-20 Martin C. Frith Make it easier to feed stdin/pipe to last-train changeset | files
2017-06-20 Martin C. Frith Add raw score to BlastTab+ format changeset | files
2017-06-15 Martin C. Frith Make last-train read sequence file "-" from stdin changeset | files
2017-06-15 Martin C. Frith Change last-dotplot's verbosity changeset | files
2017-06-15 Martin C. Frith Enable E-values for some unusual scoring schemes changeset | files
2017-06-02 Martin C. Frith Update docs changeset | files
2017-06-02 Martin C. Frith last-dotplot: get bp-per-pixel faster changeset | files
2017-06-02 Martin C. Frith Fix parsing of command-line options changeset | files
2017-05-18 Martin C. Frith last-dotplot: do e.g. chr7 annotations -> hg19.chr7 only if no ambiguity changeset | files
2017-05-18 Martin C. Frith last-dotplot: add genePred and rmsk options changeset | files
2017-05-18 Martin C. Frith last-dotplot: refactor changeset | files
2017-05-18 Martin C. Frith last-dotplot: get layer from BED score changeset | files
2017-05-18 Martin C. Frith last-dotplot: start implementing "layers" changeset | files
2017-05-18 Martin C. Frith last-dotplot: parse BED more liberally changeset | files
2017-05-17 Martin C. Frith Refactor last-dotplot changeset | files
2017-05-15 Martin C. Frith Make maf-convert to tab faster changeset | files
2017-05-15 Martin C. Frith Add lastal's -C option to last-train changeset | files
2017-05-02 Martin C. Frith Add border options to last-dotplot changeset | files
2017-05-02 Martin C. Frith Add sequence order options to last-dotplot changeset | files
2017-05-02 Martin C. Frith Tweak last-dotplot's documentation changeset | files
2017-04-18 Martin C. Frith Refactor changeset | files
2017-04-18 Martin C. Frith Improve last-train sampling for long queries, e.g. chromosomes changeset | files
2017-04-04 Martin C. Frith Made last-dotplot print width & height. changeset | files
2017-04-04 Martin C. Frith Added last-dotplot options to show sequence lengths. changeset | files
2017-04-04 Martin C. Frith Added last-dotplot options to show BED features. changeset | files
2017-04-04 Martin C. Frith Made last-dotplot faster, sometimes. changeset | files
2017-03-09 Martin C. Frith Fixed compile errors with old compilers. changeset | files
2017-03-07 Martin C. Frith Added lastal -N option to quickly get the first hits per query. changeset | files
2017-03-07 Martin C. Frith Bugfix: E-values were occasionally negative. changeset | files
2017-03-02 Martin C. Frith Enabled sequence ranges for last-dotplot. changeset | files
2017-03-02 Martin C. Frith Added trim options to last-dotplot. changeset | files
2017-03-02 Martin C. Frith Refactoring. changeset | files
2017-02-28 Martin C. Frith Refactoring. changeset | files
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