2017-11-08 Martin C. Frith Refactor last-dotplot
2017-11-08 Martin C. Frith Refactor last-dotplot
2017-11-08 Martin C. Frith Tweak dotplot labels
2017-11-08 Martin C. Frith Make last-dotplot try to find a nice font
2017-11-08 Martin C. Frith Try to fix build fails on some computers
2017-11-02 Martin C. Frith Tweak last-dotplot's label placement
2017-11-02 Martin C. Frith Refactor last-dotplot
2017-11-02 Martin C. Frith Refactor last-dotplot
2017-11-02 Martin C. Frith Change last-dotplot's label options
2017-11-02 Martin C. Frith Refactor last-dotplot
2017-11-02 Martin C. Frith Refactor last-dotplot
2017-11-02 Martin C. Frith Tweak the dotplot colors
2017-10-24 Martin C. Frith Make the code a bit more robust
2017-10-24 Martin C. Frith Make last-split work with lastdb strand option
2017-10-24 Martin C. Frith Fix some E-value & last-train fails
2017-10-20 Martin C. Frith Add lastdb strand option
2017-10-20 Martin C. Frith Refactor
2017-10-19 Martin C. Frith Start implementing reverse strands in lastdb
2017-10-19 Martin C. Frith Refactor
2017-10-19 Martin C. Frith Refactor
2017-10-19 Martin C. Frith Refactor
2017-10-10 Martin C. Frith Make last-train print the lastal version
2017-10-10 Martin C. Frith Refactor
2017-10-10 Martin C. Frith Refactor (I think)
2017-10-10 Martin C. Frith Refactor some code
2017-10-10 Martin C. Frith Make last-train work with lastdb8
2017-10-06 Martin C. Frith Add maf-convert -> chain
2017-10-06 Martin C. Frith Avoid some "can't get E-value parameters" errors
2017-10-03 Martin C. Frith Add text-rotation options to last-dotplot
2017-10-03 Martin C. Frith Fix mixed-up margin sizes in last-dotplot
2017-09-27 Martin C. Frith Try to make the gz compilation work more portably
2017-09-26 Martin C. Frith Add gz reading to: dotplot postmask train convert
2017-09-22 Martin C. Frith Make the gz stuff compile on old computers
2017-09-22 Martin C. Frith Try to make compilation more robust & portable
2017-09-22 Martin C. Frith Enable lastal, lastdb, etc to read .gz files
2017-09-22 Martin C. Frith Add option -k to last-train
2017-09-22 Martin C. Frith Add -x % option to lastal
2017-06-20 Martin C. Frith Make it easier to feed stdin/pipe to last-train
2017-06-20 Martin C. Frith Add raw score to BlastTab+ format
2017-06-15 Martin C. Frith Make last-train read sequence file "-" from stdin
2017-06-15 Martin C. Frith Change last-dotplot's verbosity
2017-06-15 Martin C. Frith Enable E-values for some unusual scoring schemes
2017-06-02 Martin C. Frith Update docs
2017-06-02 Martin C. Frith last-dotplot: get bp-per-pixel faster
2017-06-02 Martin C. Frith Fix parsing of command-line options
2017-05-18 Martin C. Frith last-dotplot: do e.g. chr7 annotations -> hg19.chr7 only if no ambiguity
2017-05-18 Martin C. Frith last-dotplot: add genePred and rmsk options
2017-05-18 Martin C. Frith last-dotplot: refactor
2017-05-18 Martin C. Frith last-dotplot: get layer from BED score
2017-05-18 Martin C. Frith last-dotplot: start implementing "layers"
2017-05-18 Martin C. Frith last-dotplot: parse BED more liberally
2017-05-17 Martin C. Frith Refactor last-dotplot
2017-05-15 Martin C. Frith Make maf-convert to tab faster
2017-05-15 Martin C. Frith Add lastal's -C option to last-train
2017-05-02 Martin C. Frith Add border options to last-dotplot
2017-05-02 Martin C. Frith Add sequence order options to last-dotplot
2017-05-02 Martin C. Frith Tweak last-dotplot's documentation
2017-04-18 Martin C. Frith Refactor
2017-04-18 Martin C. Frith Improve last-train sampling for long queries, e.g. chromosomes
2017-04-04 Martin C. Frith Made last-dotplot print width & height.